1. Leticia Agúndez, Francisco Zárate-Pérez, Martino Bardelli, Matxalen Llosa, Carlos R. Escalante, R. Michael Linden and Els Henckaerts (2018) Exchange of functional domains between a bacterial conjugative relaxase and the integrase of the human adeno-associated virus. PLoS One Jul 17; 13(7):e0200841. doi: 10.1371/journal.pone.0200841 eCollection 2018.PMID:30016371.
2. Daisuke Ibi, Mario de la Fuente Revenga, Nebojsa Kezunovic, Carolina Muguruza, Supriya A. Gaitonde, Justin M. Saunders, José L. Moreno, Maryum Ijaz, Vishaka Santosh, Alexey Kozkenkov, Terrell Holloway, Jeremy Seto, Aintzane García-Bea, Mitsumasa Kurita, Grace E. Mosley, Yan Jiang, Daniel J. Christoffel, Luis F. Callado, Scott J. Russo, Stella Dracheva, Juan F López-Giménez, Yongchao Ge, Carlos R. Escalante, J. Javier Meana, Schahram Akbarian, George W. Huntley, Javier González-Maeso. (2017) A critical role for NF-kB in the HDAC2-dependent control of synaptic remodeling and anti-psychotic-related behaviors. Accepted Nature Neuroscience.
3. Martino Bardelli, Francisco Zarate-Perez, Leticia Agundez, Nelly Jolinon, R. Michael Linden, Carlos R. Escalante and Els Henckaerts (2017) Analysis of Replicative Intermediates of Adeno-Associated Virus through Hirt Extraction and Southern Blotting. Accepted Bio-Protocols.
4. Francisco Zarate-Perez, Vishaka Santosh, Martino Bardelli, Leticia Agundez, R. Michael Linden, Els Henckaerts and Carlos R. Escalante (2017) Determination of Adeno-Associated Virus Rep DNA binding using fluorescence Anisotropy. Bio-protocol 7, Iss 6. DOI:https//doi.org/10.21769/BioProtoc.2194
5. Martino Bardelli, Francisco Zarate-Perez, Leticia Agundez, R. Michael Linden, Carlos R. Escalante and Els Henckaerts (2016) Identification of a Functionally Relevant Adeno-Associated Virus Rep68 Oligomeric Interface. J.Virol.90, 6612-6624, pii: JVI.00356-16 [Epub ahead of print]
6. Rahul Jaiswal, Malay Choudhury, Shamsu Zaman, Samarendra K. Singh, Vishaka Santosh, Deepak Bastia and Carlos R. Escalante (2016) Functional Architecture of the Reb1-Ter Complex of Schizosaccharomyces pombe. Proc.Natl.Acad.Sci. April 19; 113(16):E2267-76.doi: 10.1073 pii:201525465 Epub. 2016 Mar 28. PMID:27035982
7. Remesh, SG., Santosh,V., Escalante, CR. (2015) Structural Studies of IRF4 Reveal a Flexible Autoinhibitory Region and a compact linker domain. J.Biol.Chem. 290, 27779-90 PMID:26405037
7. Musayev, FN., Zarate-Perez, F., Bishop, C., Burgner, J.W., Escalante, CR. (2015) Structural Insights into the assembly of the Adeno-Associated Virus Type 2 Rep68 protein on the Integration site AAVS1. J.Biol.Chem. 290, 27487-99 PMID 26370092.
8. Musayev FN, Zarate-Perez F, Bardelli MR, Bishop CM, Saniev EF, Linden RM, Henckaerts E, Escalante CR. (2015) Structural Studies of AAV2 Rep68 reveal a partially structured linker and compact domain conformation. Biochemistry, 54, 5907-19 PMID 26314310.
9. Zhao H, Ghirlando R, Alfonso C. et al. (2015) A multilaboratory comparison of calibration accuracy and the performance of external references in analytical ultracentrifugation. PloS One, 10(5): e0126420 PMID 25997164
10. Rahul Jaiswal, Samarendra K. Singh, Deepak Bastia, Carlos R. Escalante. (2015) Crystallization and preliminary X-ray characterization of the eukaryotic replication terminator Reb1-Ter DNA complex. Acta Crystallographica Section F. 71, 414-418.
11. Nathalie Dutheil, Sarah Smith, Leticia Agúndez, Zoé Vincent-Mistiaen, Carlos R. Escalante, R. Linden, Els Henckaerts. (2014) Adeno-associated virus Rep represses the human integration site promoter by two pathways that are similar to those required for the regulation of the viral p5 promoter. J.Virol. 88,8227-8241.
12. Zarate-Perez F, Mansilla-Soto J, Bardelli M, Burgner JW 2nd, Villamil-Jarauta M, Kekilli D, Samso M, Linden RM, Escalante CR. (2013) The oligomeric properties of Rep68 reflect its multifunctionality. J.Virol. 87,1232-41.
13. Glasmacher E, Agrawal S, Chang AB, Murphy TL, Zeng W, Lugt BV, Khan AA, Ciofani M, Spooner C, Rutz S, Hackney J, Nurieva R, Escalante CR, Ouyang W, Littman DR, Murphy KM, Singh H. (2012) A genomic regulatory element that directs assembly and function of immune-specific AP-1 IRF complexes. Science 338, 975-80.
14. Zarate-Perez F. Bardelli M, Burgner JW 2nd, Villamil-Jarauta M. Das K, Kekilli D, Mansilla-Soto J, Linden RM and Escalante CR. (2012) The interdomain linker of AAV-2 Rep68 is an integral part of its oligomerization domain:role of a conserved SF3 helicase residue in oligomerization. PloS Pathogens Jun;8(6)e 1002764.
15. Malu S, De Ioannes P, Kozlov M, Greene M, Francis D, Hanna M, Pena J, Escalante CR, Kurosawa A, Erdjument-Bromage H, Tempst P, Adachi N, Vezzoni P, Villa A, Aggarwal AK, Cortes P. (2012) Artemis C-terminal region facilitates V(D)J recombination through its interactions with DNA ligase IV and DNA-PKcs. J.Exp.Med. 209, 955-63.
16. DeIoaness, P., Aggarwal, AK., Escalante, C.R. (2011) Structures of Apo IRF-3 and IRF-7 DNA Binding Domains: Effect of loop L1 on DNA Binding. Nucleic Acids. Res. 39, 7300-7307
17. Mansilla-Soto, J., Yoon-Robarts, Rice,M.,W., Arya, S., Escalante, C.R., and Linden, R.M. (2009) DNA structure modulates the oligomerization properties of the AAV initiator protein Rep68. PLos Pathogen, 5:e1000513.
18. Gupta YK, Lee TH, Edwards TA, Escalante CR, Kadyrova LY, Wharton RP, Aggarwal AK. (2009) Co-occupancy of two Pumilio molecules on a single hunchback NRE. RNA 15,1029-35.
19. Roth-Walter F, Berin MC, Arnaboldi P, Escalante CR, Dahan S, Rauch J, Jensen-Jarolim E and Mayer L. (2008) Pasteurization of milk proteins promotes allergic sensitization by enhancing uptake through Peyer’s patches. Allergy 15(6):1029-35.
20. Escalante,C.R., Nistal-villal,E., Shen, L., Garcia-Sastre, A. and Aggarwal, A.K. (2007) X-ray crystal structure of IRF-3 bound to the PRDIII-I element of the β-Interferon promoter. Mol. Cell 26, 703-716.
21. Gazdoui, S., Yamoah, K., Escalante, CR., Tappin, I., Bermudez, V., Aggarwal, A.K. and Pao, Z.Q. (2005) Proximity-induced activation of human Cdc34 through heterologous dimerization.Proc.Natl.Acad.Sci.USA 102, 15053-15058.
22. Yoon-Robarts M, Blouin, AG, Bleker, S., Kleinmschmidt, JA., Aggarwal, AK; Escalant, CR, Linden RM. Residues within the B’ motif are critical for DNA binding by the superfamily 3 helicase Rep40 of adeno-associated virus type 2. J.Biol.Chem. 279, 50472-50481.
23. James, JA, Aggarwal, AK, Linden, RM, and Escalante, CR. (2004) Structure of adeno-associated virus type 2 Rep40-ADP complex: insights into nucleotide recognition and catalysis by superfamily 3 helicases. Proc.Natl.Acad.Sci. USA 101, 12455-12460.
24. Jose Trincao, Robert E Johnson, William T Wolfle, Carlos R Escalante, Satya Prakash, Louise Prakash & Aneel K Aggarwal. (2004) Dpo4 is hindered in extending a GT mismatch by a reverse wobble. Nat.Struct.& Mol.Biol. 11, 457-462.
25. Sharon A. Townson, James C. Samuelson, Éva Scheuring Vanamee, Thomas A. Edwards, Carlos R. Escalante, Shuang-yong Xu and Aneel K. Aggarwal (2004) Crystal Structure of BstYI at 1.85 Å Resolution: A Thermophilic Restriction Endonuclease with Overlapping Specificities to BamHI and BglII. J.Mol.Biol.338:725-733.
26. Liu, S., Xiau, G., Chen, Y., He, Y., Niu, J., Escalante, CR., Xiong, H., Farmar, J., Debnath, A.K., Tien, P., and Jiang, S. (2004) Interaction between heptad repeat 1 and 2 regions in spike protein of SARS-associated coronavirus: implications for virus fusogenic mechanism and identification of fusion inhibitors. Lancet 363 : 938-947.
27. James, JA., Escalante, CR., Yoon-Robarts, M., Edwards, TA., Linden, RM., Aggarwal, AK. (2003) Crystal structure of the SF3 helicase from adeno-associated virus type 2. Structure 11:1025-35.
28. Escalante, CR., Brass AL., Pongubala JM., Shatova, E., Shen., L, Singh, H., Aggarwal AK. (2002) Crystal structure of PU.1/IRF-4/DNA ternary complex. Mol. Cell.10:1097-105.
29. Kumar, V., Carlson, JE., Ohgi, KA., Edwards, TA., Rose, DW., Escalante, CR., Rosenfeld, MG., Aggarwal, AK. (2002) Transcription corepressor CtBP is an NAD(+)-regulated dehydrogenase. Mol Cell.10:857-69.
30. Green, JB, Edwards, TA., Trincao, J., Escalante, CR., Wharton, RP., Aggarwal, AK,.(2002),Crystallization and characterization of Smaug: a novel RNA-binding motif. Biochem Biophys Res Commun.11:1085-8.
31. Li, Z., Hou, WS., Escalante-Torres, CR., Gelb, BD., Bromme, D., (2002) Collagenase activity of cathepsin K depends on complex formation with chondroitin sulfate. J Biol Chem.277:28669-76.
32. Escalante, CR., Shen, L, Escalante, MC., Brass, AL., Edwards, TA., Singh, H., Aggarwal, AK. (2002) Crystallization and characterization of PU.1/IRF-4/DNA ternary complex.J Struct.Biol.139:55-9.
33. Escalante, CR., Shen, L., Thanos, D., Aggarwal, AK. (2002) Structure of NF-kappaB p50/p65 heterodimer bound to the PRDII DNA element from the interferon-beta promoter. Structure 10:383-91.
34. Trincao, J., Johnson, RE., Escalante, CR., Prakash, S., Prakash, L., Aggarwal, AK. (2001) Structure of the catalytic core of S. cerevisiae DNA polymerase eta:implications for translesion DNA synthesis. Mol Cell.8:417-426.
35. Edwards, TA., Trincao, J., Escalante, CR., Wharton, RP., Aggarwal, AK. (2001) Crystallization and characterization of Pumilo: a novel RNA binding protein. J Struct Biol.132:251-254.
36. Senger, K., Merika, M., Agalioti, T., Yie, J., Escalante, CR, Chen, G., Aggarwal, AK., Thanos, D.(2001) Gene repression by coactivator repulsion. Mol Cell.6:931-937.
37. Qiu, L., Escalante, CR., Aggarwal, AK., Wilson, PD., Burrow, CR.(2000) Monomeric midkine induces tumor cell proliferation in the absence of cell-surface proteoglycan binding. Biochemistry.39:5977-87.
38. Escalante, CR., Yie J., Thanos, D., Aggarwal, AK., (1998) Structure of IRF-1 with bound DNA reveals determinants of interferon regulation. Nature 391:103-106.
39. Escalante, CR., Yie, J., Thanos, D., Aggarwal, AK. (1997) Expression, purification, and co-crystallization of IRF-I bound to the interferon-beta element PRDI. FEBS Lett.414:219-220.
40. Escalante, CR., Qasba, P.D., and Yang, D.C. (1994). Expression of human aspartyl-tRNA synthetase in COS cells. J.Mol & Cell.Biochem. 140:55-58.
41. Escalante, CR., Yang, D.C. (1993) Expression of human aspartyl- tRNA synthetase in Escherichia coli: functional analysis of the N-terminal putative amphipathic helix. J.Biol.Chem. 268:6014-6023.